Comparison
paper-qa vs graphrag
Verdict
Pick paper-qa if paperQA2 version 5 is a retrieval-augmented generation (RAG) system optimized for extracting information from scientific documents, enhancing user queries with citations; pick graphrag if graphRAG is a research-oriented modular graph-based Retrieval-Augmented Generation system designed to enhance LLM outputs with structured data extracted from unstructured text.
Markdown twin · paper-qa alternatives · graphrag alternatives
GraphCanon updated Sep 20, 2026
21views this month
Trust & integrity
| Signal | paper-qa | graphrag |
|---|---|---|
| Maintenance | Very active (5d since push) As of Aug 18, 2026 · github_public_v1 | Very active (1d since push) As of Sep 18, 2026 · github_public_v1 |
| Provenance | Not a fork · Organization account As of Aug 18, 2026 · github_public_v1 | Not a fork · Organization account As of Sep 18, 2026 · github_public_v1 |
| OSV dependency advisories | No lockfile (source not queried) As of Jul 11, 2026 · osv@v1 | No lockfile (source not queried) As of Sep 18, 2026 · osv@v1 |
| deps.dev advisories | Not queried deps.dev@v1 | Not queried deps.dev@v1 |
| OpenSSF Scorecard | Not queried openssf-scorecard@v1 | Not queried openssf-scorecard@v1 |
Tagline
- paper-qa
- High accuracy RAG for answering questions from scientific documents with citations
- graphrag
- A modular graph-based Retrieval-Augmented Generation (RAG) system
Stars
- paper-qa
- 9.0k
- graphrag
- 36k
Forks
- paper-qa
- 907
- graphrag
- 3.8k
Open issues
- paper-qa
- 141
- graphrag
- 38
Language
- paper-qa
- Python
- graphrag
- Python
Adopt for
- paper-qa
- PaperQA2 version 5 is a retrieval-augmented generation (RAG) system optimized for extracting information from scientific documents, enhancing user queries with citations.
- graphrag
- GraphRAG is a research-oriented modular graph-based Retrieval-Augmented Generation system designed to enhance LLM outputs with structured data extracted from unstructured text.
Persona
- paper-qa
- -
- graphrag
- -
Runtime
- paper-qa
- -
- graphrag
- -
License
- paper-qa
- 'Apache-2.0' - Permissive free software license that allows for both non-commercial use and commercial exploitation of the package.
- graphrag
- MIT License
Last pushed
- paper-qa
- Aug 12, 2026
- graphrag
- Sep 16, 2026
Categories
- paper-qa
- Data & Retrieval, Model Training
- graphrag
- Data & Retrieval, LLM Frameworks
Trust and health
Days since push
- paper-qa
- 5d
- graphrag
- 1d
Open issues (now)
- paper-qa
- 141
- graphrag
- 38
Stars delta
- paper-qa
- +154 (30d)
- graphrag
- +506 (30d)
Open issues delta
- paper-qa
- 0 (30d)
- graphrag
- -8 (30d)
Full report
- paper-qa
- Trust report
- graphrag
- Trust report
Typed relationship
Choose paper-qa if…
- License: paper-qa is Apache-2.0, graphrag is MIT.
- Requirements: Min 4 GB RAM.
- PaperQA2 and GraphRAG both serve as modular systems for RAG, focusing on retrieval from structured sources to enhance machine learning models.
- Tags unique to paper-qa: ai, science, search.
- Also covers Model Training.
- Your project specifically requires processing and querying scientific documents, as PaperQA2 offers specialized capabilities tuned for this domain.
When NOT to use paper-qa
- If your use case does not involve scientific document processing, another RAG system better suited to your specific type of documents (e.g., legal, medical) might be more fitting.
- In scenarios where real-time performance is critical and extensive indexing or access to external APIs for large-scale paper handling becomes a bottleneck.
Choose graphrag if…
- License: graphrag is MIT, paper-qa is Apache-2.0.
- Pricing: Free to use under the MIT License, but users should be aware of potential costs associated with indexing operations..
- Requirements: Min 8 GB RAM; GraphRAG is a Python-based system and requires a Python environment.; Users should fine-tune their prompts for the best results..
- PaperQA2 and GraphRAG both serve as modular systems for RAG, focusing on retrieval from structured sources to enhance machine learning models.
- Tags unique to graphrag: gpt, gpt-4, gpt4, graphrag.
- Also covers LLM Frameworks.
- When you need to extract meaningful, structured data from unstructured text using the power of LLMs.
When NOT to use graphrag
- If you require a tool that is actively developed and accepts new features or contributions, as GraphRAG is largely in maintenance mode.
- When cost is a significant concern, as GraphRAG indexing can be an expensive operation.
- If you need a production-ready, officially supported solution, as GraphRAG is a research project and not an officially supported Microsoft offering.
Explore
Sources
Every stat on this page traces to a dated GitHub sync, license file, enrichment field, or trust scan.
- GitHub stars (Future-House/paper-qa) · observed Sep 20, 2026
- GitHub forks (Future-House/paper-qa) · observed Sep 20, 2026
- Last push (Future-House/paper-qa) · observed Aug 12, 2026
- License file (Apache-2.0) · observed Sep 20, 2026
- Decision facts (enrichment) · observed Jul 12, 2026
- Trust scan (lockfile / OSV) · observed Jul 11, 2026
- GitHub stars (microsoft/graphrag) · observed Sep 20, 2026
- GitHub forks (microsoft/graphrag) · observed Sep 20, 2026
- Last push (microsoft/graphrag) · observed Sep 16, 2026
- License file (MIT) · observed Sep 20, 2026
- Decision facts (enrichment) · observed Sep 18, 2026
- Trust scan (lockfile / OSV) · observed Sep 18, 2026
GitHub stars on cards: paper-qa 9.0k · graphrag 36k (synced Sep 20, 2026).
Common questions
- What is the difference between paper-qa and graphrag?
- paper-qa: High accuracy RAG for answering questions from scientific documents with citations. graphrag: A modular graph-based Retrieval-Augmented Generation (RAG) system. See the comparison table for live GitHub stats and shared categories.
- When should I choose paper-qa over graphrag?
- Choose paper-qa over graphrag when License: paper-qa is Apache-2.0, graphrag is MIT; Requirements: Min 4 GB RAM; PaperQA2 and GraphRAG both serve as modular systems for RAG, focusing on retrieval from structured sources to enhance machine learning models; Tags unique to paper-qa: ai, science, search; Also covers Model Training; Your project specifically requires processing and querying scientific documents, as PaperQA2 offers specialized capabilities tuned for this domain.
- When should I choose graphrag over paper-qa?
- Choose graphrag over paper-qa when License: graphrag is MIT, paper-qa is Apache-2.0; Pricing: Free to use under the MIT License, but users should be aware of potential costs associated with indexing operations.; Requirements: Min 8 GB RAM; GraphRAG is a Python-based system and requires a Python environment.; Users should fine-tune their prompts for the best results.; PaperQA2 and GraphRAG both serve as modular systems for RAG, focusing on retrieval from structured sources to enhance machine learning models; Tags unique to graphrag: gpt, gpt-4, gpt4, graphrag; Also covers LLM Frameworks; When you need to extract meaningful, structured data from unstructured text using the power of LLMs.
- When should I avoid paper-qa?
- If your use case does not involve scientific document processing, another RAG system better suited to your specific type of documents (e.g., legal, medical) might be more fitting. In scenarios where real-time performance is critical and extensive indexing or access to external APIs for large-scale paper handling becomes a bottleneck.
- When should I avoid graphrag?
- If you require a tool that is actively developed and accepts new features or contributions, as GraphRAG is largely in maintenance mode. When cost is a significant concern, as GraphRAG indexing can be an expensive operation. If you need a production-ready, officially supported solution, as GraphRAG is a research project and not an officially supported Microsoft offering.
- Is paper-qa or graphrag more popular on GitHub?
- graphrag has more GitHub stars (36,025 vs 9,048). Stars measure visibility, not whether either tool fits your constraints.
- Are paper-qa and graphrag open source?
- Yes - both are open-source projects on GitHub (paper-qa: Apache-2.0, graphrag: MIT).
- Where can I find alternatives to paper-qa or graphrag?
- GraphCanon lists graph-backed alternatives at paper-qa alternatives and graphrag alternatives (paper-qa markdown twin, graphrag markdown twin), ranked by typed relationship edges rather than popularity votes.
- Is there a machine-readable version of this comparison?
- Yes. The markdown twin at this comparison mirrors this page for agents and LLM crawlers, with the same stats table and FAQ answers.
- Which is better maintained, paper-qa or graphrag?
- paper-qa: Very active. graphrag: Very active. Compare maintenance labels, days since push, and release cadence in the trust section below - stars alone do not measure maintenance.
- Where are the full trust reports for paper-qa and graphrag?
- GraphCanon publishes per-repo trust reports with dated maintenance, provenance, and scan summaries: paper-qa trust report; graphrag trust report.